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UID:pretalx-foss4g-europe-2024-academic-track-QCWX9W@talks.staging.osgeo.or
 g
DTSTART;TZID=EET:20240703T113000
DTEND;TZID=EET:20240703T120000
DESCRIPTION:The effects of climate change\, together with human activities\
 , are stressing many natural resources. Such effects are altering distribu
 tion patterns\, such as precipitation\, and known dynamics in all natural 
 spheres (Hydrosphere\, Biosphere\, Lithosphere\, and Atmosphere). The moni
 toring of environmental parameters is becoming of primary importance to be
 tter understand the changes that we need to address. Satellite images\, la
 boratory analysis of samples\, and high-end real-time monitoring systems o
 ffer solutions to this problem. However\, often such solutions require pro
 prietary tools to better exploit data and interact with them. The open sci
 ence paradigm fosters accessibility to data\, scientific results\, and too
 ls at all levels of society. Hence\, in this project\, we aimed to apply s
 uch an approach to aid in managing a new phenomenon affecting Lake Lugano\
 , primarily caused by the increase in water temperatures and the high load
  of nutrients from human activities. In fact\, over the past years and par
 ticularly in 2023\, distributed Harmful Algal Blooms (HABs) appeared on th
 e lake\, raising awareness of this phenomenon that can be dangerous for hu
 man and animal health. Since HABs are distributed on the water lake surfac
 e\, an open source cost-effective solution based on open hardware\, softwa
 re and standards can potentially increase the spatial resolution to collec
 t more dense measurements. The excessive algae growth could be composed by
  Cyanobacteria which can produce a wide range of toxic metabolities\, incl
 uding microcystins (MCs). These cyanotoxins\, whose negative effect can be
  both acute at high concentrations and at low doses (Chen et al.\, 2009\; 
 Li et al.\, 2011)\, are produced by common species in Lake Lugano. Among t
 hese\, the most problematic is Microcystis\, as it can give rise to blooms
  during the summer period that accumulate along the shores due to wind and
  currents. In these areas\, the risk of exposure to people and animals is 
 higher\, especially in bathing areas. Considering the potential risks to h
 uman and animal health\, in this project an open early warning monitoring 
 system has been designed and built upon previous experiences in water lake
  monitoring (Strigaro et al.\, 2022) by leveraging the benefits derived fr
 om the application of open science principles. \nMost monitoring plans use
  microscopic counts of cyanobacteria as an indicator of toxicity risk. How
 ever\, these analyses are time-consuming\, therefore\, in addition to or a
 s an alternative to classical methods\, sensors capable of measuring algal
  pigments are increasingly being used. In particular\, phycocyanin (PC)\, 
 characteristic of cyanobacteria\, can be used as an indicator of cyanobact
 erial biomass\, thus estimating the potential exceedance of critical level
 s of microcystins. Based on previous studies\, this project aimed to devel
 op a high-frequency sensor-based early warning system for real-time detect
 ion of phycocyanin in surface waters for bathing use. In particular\, the 
 study aimed to i) develop a pilot system for real-time phycocyanin surveil
 lance\, using a high-frequency fluorimeter positioned below the surface ne
 ar a bathing beach\; ii) develop a data management software that automatic
 ally notifies the exceeding of predicted phycocyanin risk thresholds\; iii
 ) test the system during cyanobacterial blooms\, comparing the measured ph
 ycocyanin values with microcystin concentrations.\nThe hardware solution c
 onsists of a Raspberry Pi connected to a Trilux fluorimeter by Chelsea Tec
 hnologies\, which allows the measurement of three algal pigments (Chloroph
 yll-a\, Phycocyanin\, and Phycoerythrin)\, along with a module for transmi
 tting data using NB-IoT. On the node\, leveraging the concept of edge comp
 uting\, the istSOS software has been installed. istSOS is an open-source P
 ython implementation of the Sensor Observation Service of the Open Geospat
 ial Consortium\, fostering data sharing and interoperability. Raw data are
  retrieved from the sensor every minute and then stored in the local insta
 nce of istSOS. Simultaneously\, a simple on-the-fly quality control is act
 ivated to flag each value with a quality index. The data are then aggregat
 ed every 10 minutes and transmitted every 15 minutes to the data warehouse
 . On the server side\, another instance of istSOS is hosted to provide dat
 a for reports\, post-processing validation\, and the early warning system.
  Additionally\, the open-source software Grafana has been explored to set 
 up alerts based on three different thresholds. Each threshold has been dev
 eloped including a hypothetical bathing water management plan\, and they a
 re expressed as follows:\n\n    1. Monitoring - PC threshold of 3.4 Chl-a 
 eq µg/L\, corresponding to a value of 5 μg/L of MCs (with PC greater tha
 n Chl-a). This threshold defines abundant phytoplankton growth with domina
 nce of cyanobacteria. Upon exceeding this threshold\, frequent monitoring 
 of the situation and identification of the dominant genus is recommended t
 o predict its potential toxicity.\n\n    2. Alert - PC threshold of 6.7 Ch
 l-a eq µg/L\, corresponding to a value of 10 μg/L of MCs. This threshold
  defines abundant cyanobacterial growth and the potential onset of a bloom
 . Upon exceeding this threshold\, site inspection\, identification of the 
 dominant genus\, and cyanotoxin analysis are recommended.\n\n    3. Prohib
 ition - PC threshold of 13.4 Chl-a eq µg/L\, corresponding to a value of 
 20 μg/L of MCs. This threshold defines an ongoing cyanobacterial bloom. U
 pon exceeding this threshold\, the toxic risk is at its maximum\, as we ar
 e approaching the maximum limits imposed for the bathing prohibition. Ther
 efore\, temporary bathing prohibition is recommended until confirmation of
  bloom toxicity with verification of any exceeding of the World Health Org
 anization limit of 25 μg/L of MCs.\n\nThe adoption of open hardware\, sof
 tware\, and standards allows the implementation of a toolchain that can be
  easily replicated. The promising results and openness of the solution wil
 l permit further expansion of the network to help decision makers and rese
 archer to better manage and study this phenomena using sensor data. The so
 lution can also effectively increase citizen awareness by implementing kit
 s that local stakeholders can use to monitor the status of the lake water\
 , providing additional data.
DTSTAMP:20260417T104531Z
LOCATION:Omicum
SUMMARY:An open early-warining system prototype to help in management and s
 tudy algal blooms on Lake Lugano - Daniele Strigaro
URL:https://talks.staging.osgeo.org/foss4g-europe-2024-academic-track/talk/
 QCWX9W/
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